| Issue Date | Title | Author(s) |
| 2013 | Changes in molecular biology of chronic myeloid leukemia in tyrosine kinase inhibitor era | Cömert, Melda; Baran, Yusuf ; Saydam, Güray |
| May-2013 | Changes in protein profiles of multiple myeloma cells in response to bortezomib | Turan, Taylan; Şanlı Mohamed, Gülşah ; Baran, Yusuf |
| Apr-2014 | Characterization of a cDNA from Beta maritima that confers nickel tolerance in yeast | Bozdağ, Gönensin Ozan; Kaya, Alaattin; Koç, Ahmet ; Noll, Gundula A.; Prüfer, Dirk; Karakaya, Hüseyin Çağlar |
| 2019 | Characterization of long living yeast deletion mutants that lack mitochondrial metabolism genes DSS1, PPA2 and AFG3 | Muid, Khandaker Ashfaqul; Kimyon, Önder; Reza, Shahadat Hasan; Karakaya, Hüseyin Çağlar ; Koç, Ahmet |
| 2017 | Characterization of the BETA1 gene, which might play a role in Beta vulgaris subsp. Maritima salt tolerance | Uysal, Özge; Çakıroğlu, Çiğdem; Koç, Ahmet ; Karakaya, Hüseyin Çağlar |
| 2014 | Characterization of the human sialidase Neu4 gene promoter | Seyrantepe, Volkan ; Delman, Murat |
| 2013 | Characterization of two genes encoding metal tolerance proteins from Beta vulgaris subspecies maritima that confers manganese tolerance in yeast | Erbaşol, Işıl; Bozdağ, Gönensin Ozan; Koç, Ahmet ; Pedas, Pia; Karakaya, Hüseyin Çağlar |
| Feb-2007 | Checkpoint deficient rad53-11 yeast cannot accumulate dNTPs in response to DNA damage | Koç, Ahmet ; Merrill, Gary F. |
| 2021 | Chromatographic analysis for targeted metabolomics of antioxidant and flavor-related metabolites in tomato | Gürbüz Çolak, Nergiz ; Tek, Neslihan ; Frary, Anne ; Doğanlar, Sami |
| 2006 | Chromatographic determination of glycoalkaloids in eggplant | Tek, Neslihan ; Tek, Neslihan |
| 2017 | Cloning, expression, and activity analysis of human cathepsin C in the yeast pichia pastoris | Dağlıoğlu, Cenk |
| 2019 | CNT incorporated polyacrilonitrile/polypyrrole nanofibers as keratinocytes scaffold | İnce Yardımcı, Atike; Aypek, Hande; Öztürk, Özgür; Yılmaz, Selahattin ; Özçivici, Engin ; Meşe, Gülistan ; Selamet, Yusuf |
| Jun-2010 | Combination of fludarabine and imatinib induces apoptosis synergistically through loss of mitochondrial membrane potential and increases in caspase-3 enzyme activity in human K562 chronic myleloid leukemia cells | Baran, Yusuf ; Öztekin, Coşkun; Başsoy, Esen Yonca |
| Sep-2014 | Comparative development of knowledge-based bioeconomy in the European Union and Turkey | Çelikkanat Ozan, Didem; Baran, Yusuf |
| 2004 | Comparative fine mapping of fruit quality QTLs on chromosome 4 introgressions derived from two wild tomato species | Yates, Heather E.; Frary, Anne ; Doğanlar, Sami ; Frampton, Anna; Eannetta, Nancy T.; Uhlig, John; Tanksley, Steven D. |
| Aug-2002 | A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the Solanaceae | Doğanlar, Sami ; Frary, Anne ; Daunay, Marie-Christine; Lester, Richard N.; Tanksley, Steven D. |
| 2003 | Comparative genetics of crop plant domestication and evolution | Frary, Anne ; Doğanlar, Sami |
| 2023 | Comparative membrane lipidomics of hepatocellular carcinoma cells reveals diacylglycerol and ceramide as key regulators of Wnt/β-catenin signaling and tumor growth | Azbazdar, Yağmur; Demirci, Yeliz; Heger, Guillaume; İpekgil, Doğaç; Karabiçici, Mustafa; Özhan, Güneş |
| Aug-2021 | Comparative proteome profiles of methicillin-resistant staphylococcus aureus in response to vanillic acid and 2-hydroxycinnamic acid | Keman, Deniz ; Soyer, Ferda |
| 2013 | Comparison of four Ab initio MicroRNA prediction tools | Saçar, Müşerref Duygu; Allmer, Jens |
| 2014 | Comparison of ishage-based CD34 (+) cell enumeration protocols on BD facs canto ıı and attune flow cytometers | Kozanoğlu, İlknur; Ünver, Gülşah; Sarıtürk, Çağla; Baran, Yusuf ; Yeral, Mahmut; Boğa, Can; Özdoğu, Hakan |
| Jan-2012 | Comparison of ROS formation and antioxidant enzymes in Cleome gynandra (C 4) and Cleome spinosa (C 3) under drought stress | Uzilday, Barış; Türkan, İsmail; Sekmen, Aşkım Hediye; Özgür, Rengin; Karakaya, Hüseyin Çağlar |
| Oct-2010 | Compartmentalization and regulation of mitochondrial function by methionine sulfoxide reductases in yeast | Kaya, Alaattin; Koç, Ahmet ; Lee, Byung Cheon; Fomenko, Dmitri E.; Rederstorff, Mathieu; Krol, Alain; Lescure, Alain; Gladyshev, Vadim N. |
| 2014 | Computational and bioinformatics methods for microRNA gene prediction | Allmer, Jens |
| 2012 | Computational methods for ab initio detection of microRNAs | Allmer, Jens ; Yousef, Malik |
| 2014 | Computational methods for microRNA target prediction | Hamzeiy, Hamid; Yousef, Malik; Allmer, Jens |
| 2016 | Computational miRNomics | Allmer, Jens ; Yousef, Malik |
| 2017 | Computational miRNomics - Integrative Approaches | Hofestaedt, Ralf; Schreiber, Falk; Sommer, Bjoern; Allmer, Jens |
| Oct-2014 | Computational prediction of MicroRNAs from toxoplasma gondii potentially regulating the hosts' gene expression | Saçar, Müşerref Duygu; Bağcı, Caner; Allmer, Jens |
| 2020 | Connexin 32 induces pro-tumorigenic features in MCF10A normal breast cells and MDA-MB-231 metastatic breast cancer cells | Adak, Aslı; Ünal, Yağmur Ceren ; Yücel, Simge ; Vural, Zehra; Turan, Fatma Başak; Yalçın Özuysal, Özden ; Meşe, Gülistan |
| Jul-2022 | Connexin 32 overexpression increases proliferation, reduces gap junctional intercellular communication, motility and epithelial-to-mesenchymal transition in Hs578T breast cancer cells | Uğur, Deniz ; Güngül, Taha Buğra ; Yücel, Simge ; Özçivici, Engin ; Yalçın Özuysal, Özden ; Meşe Özçivici, Gülistan |
| 2018 | Connexin 32’nin farklı metastatik özellikleri olan meme kanseri hücrelerinde oynadığı rollerin araştırılması | Özçivici, Gülistan Meşe; Özuysal, Özden Yalçın |
| Jan-2016 | Connexin26 mutations causing palmoplantar keratoderma and deafness interact with connexin43, modifying gap junction and hemichannel properties | Shuja, Zunaira; Li, Leping; Gupta, Shashank; Meşe, Gülistan ; White, Thomas W. |
| Aug-2002 | Conservation of gene function in the Solanaceae as revealed by comparative mapping of domestication traits in eggplant | Doğanlar, Sami ; Frary, Anne ; Daunay, Marie-Christine; Lester, Richard N.; Tanksley, Steven D. |
| 2019 | Corrigendum to “The importance of boron in biological systems” [J. Trace
Elem. Med. Biol. 45 (2018) 156–162] | Uluışık, İrem; Karakaya, Hüseyin Çağlar ; Koç, Ahmet |
| Oct-2017 | Cry1Ac-mediated resistance to tomato leaf miner (Tuta absoluta) in tomato | Şelale, Hatice ; Dağlı, Fatih; Mutlu, Nedim; Doğanlar, Sami ; Frary, Anne |
| 4-Mar-2015 | Cultivar origin and admixture detection in Turkish olive oils by SNP-based CAPS assays | Uncu, Ali Tevfik; Frary, Anne ; Doğanlar, Sami |
| 2012 | Cumulative clinical experience from a decade of use: imatinib as first-line treatment of chronic myeloid leukemia | Baran, Yusuf ; Saydam, Güray |
| 2021 | Current status and perspectives of protease inhibitors and their combination with nanosized drug delivery systems for targeted cancer therapy | Rudzinska, Magdalena; Dağlıoğlu, Cenk ; Savvateeva, Lyudmila, V; Kaci, Fatma Necmiye; Antoine, Rodolphe; Zamyatnin, Andrey A., Jr. |
| 2010 | The current status of thrips parasitoids Ceranisus (Hymenoptera: Eulophidae) species in Turkey based on morphology and 28S D2 rDNA | Doğanlar, Oğuzhan; Doğanlar, Mikdat; Frary, Anne |
| 15-Dec-2011 | The Cx26-G45E mutation displays increased hemichannel activity in a mouse model of the lethal form of keratitis-ichthyosis-deafness syndrome | Meşe, Gülistan ; Sellitto, Caterina; Li, Leping; Wang, Hongzhan; Valiunas, Virginijus; Richard, Gabriele; Brink, Peter R.; White, Thomas W. |
| 2022 | Cytoplasmically localized tRNA-derived fragments inhibit translation in Drosophila S2 cells | Hamid, Syed Muhammad; Akgül, Bünyamin |
| 2014 | Cytotoxic and apoptotic effects of fisetin, hesperetin and vitexinon acute promyelocytic leukemia cells | Adan Gökbulut, Aysun ; Baran, Yusuf |
| 2014 | Cytotoxic and cytostatic effects of ponatinib on imatinib-sensitive and-resistant chronic myeloid leukemia cells | Yandım, Melis Kartal; Baran, Yusuf |
| 2013 | Cytotoxic effects of apigenin on multiple myeloma cells | Baran, Yusuf ; Yılmaz, S. ; Cincin, Zeynep; Kozanoğlu, İlknur; Çakmakoğlu, Bedia; Özdoğu, Hakan |
| 2010 | Cytotoxic effects of resveratrol on imatinib sensitive and resistant K562 chronic myeloid leukemia cells | Can, Geylani; Baran, Yusuf |
| 2019 | Cytotoxic tolerance of healthy and cancerous bone cells to anti-microbial phenolic compounds depend on culture conditions | Karadaş, Özge; Meşe, Gülistan ; Özçivici, Engin |
| 2013 | Data mining for microrna gene prediction: On the impact of class imbalance and feature number for microrna gene prediction | Saçar, Müşerref Duygu; Allmer, Jens |
| 2016 | Database normalization is crucial for reliable protein identification in mass spectrometry-based proteomics | Has, Canan; Mungan, Mehmet Direnç; Çiftçi, Cansu; Allmer, Jens |
| Jun-2023 | De-sealing reverses habitat decay more than increasing groundcover vegetation | Couch, Virginia ; Salata, Stefano ; Saygın, Nicel ; Frary, Anne ; Arslan, Bertan |
| 2020 | Deep learning based segmentation pipeline for label-free phase-contrast microscopy images | Ayanzadeh, Aydın; Yalçın Özuysal, Özden ; Okvur, Devrim Pesen ; Önal, Sevgi; Töreyin, Behçet Uğur; Ünay, Devrim |
| 2018 | Deep sequencing reveals two Jurkat subpopulations with distinct miRNA profiles during camptothecin-induced apoptosis | Erdoğan, İpek ; Coşacak, Mehmet İlyas; Nalbant, Ayten ; Akgül, Bünyamin |
| 2016 | Deletion of sialidase NEU3 causes progressive neurodegeneration in Tay-Sachs mice | Seyrantepe, Volkan |
| 2017 | Delineating the impact of machine learning elements in pre-microRNA detection | Saçar Demirci, Müşerref Duygu; Allmer, Jens |
| 2014 | Deniz pancarı bitkisinde mangan toleransında rol oynayan genlerin tanımlanması | Karakaya, Hüseyin Çağlar |
| Jul-2022 | The designing of a gel formulation with chitosan polymer using liposomes as nanocarriers of amphotericin B for a non-invasive treatment model of cutaneous leishmaniasis | Gürbüz, Nergiz ; Çetin Uyanıkgil, Emel Öykü; Özbel, Yusuf; Töz, Seray |
| Nov-2022 | Detection and restoration pipeline for phase contrast microscopy time series images | Uçar, Mahmut; Iheme, Leonardo O.; Önal, Sevgi; Yalçın Özuysal, Özden ; Pesen Okvur, Devrim ; Töreyin, Behçet U.; Ünay, Devrim |
| 2016 | Detection of physiological and genotoxic damages reflecting toxicity in kalanchoe clones | Özyiğit, İbrahim İlker; Yılmaz, S. ; Doğan, İlhan ; Sakçalı, Mehmet Serdal; Tombuloğlu, Güzin; Demir, Göksel |
| 2016 | Detection of the contamination sources of Listeria monocytogenes in pickled white cheese production process line and genotyping with the pulsed-field gel electrophoresis method | Telli, Nihat; Güner, Ahmet; Soyer Dönmez, Ferda ; Özdemir, Özgün Öykü |
| Mar-2021 | Detection of the metastatic potential of breast cancer cell lines to specific target tissues | Fıratlıgil Yıldırır, Burcu |
| 2013 | Determination of cytotoxic and apoptotic effects of caffeic acid phenethyl ester and gossypol in combination with fludarabine at a molecular level in acute lymphoblastic leukemia cells | Baran, Yusuf ; İskender, G.; Pişkin, Özden; Özcan, Mehmet Ali |
| Dec-2011 | Determination of genetic diversity in watermelon [Citrullus lanatus (Thunb.) Matsum & Nakai] germplasm | Ulutürk, Zehra İpek; Frary, Anne ; Doğanlar, Sami |
| 2013 | Determination of metal deposition and its effects on mineral nutrient uptake status of pinus brutia ten. For assessment of pollution impact in its habitat-Istanbul | Yalçın, İbrahim Ertuğrul; Demir, Göksel; Özyiğit, İbrahim İlker; Doğan, İlhan ; Yarcı, Celal |
| 2022 | Determination of resistance levels to Clavibacter michiganensis subsp. michiganensis in some Solanum species | Şanver, Utku; Akköse Baytar, Asena ; Özaktan, Hatice; Frary, Anne ; Doğanlar, Sami |
| Mar-2012 | Determination of some heavy metals and mineral nutrients of bay tree (Laurus nobilis L.) in Bartin city, Turkey | Yaşar, Ülkühan; Özyiğit, İbrahim İlker; Yalçın, İbrahim Ertuğrul; Doğan, İlhan ; Demir, Göksel |
| 2002 | Determination of the effects of biomaterials on human peripheral blood mononuclear cells (PBMC) | Sudağıdan, Mert; Güneş, Hatice ; Harsa, Şebnem |
| 2021 | Determination of therapeutic effects of multifunctional micelle-based nanocarriers on breast cancer cells | Ulu, Gizem Tuğçe ; Bayram, Nazende Nur; Abdulhadi, N.; Gurdap, S.; Isoglu, A.; Isoglu, S. D.; Baran, Yusuf |
| 2020 | Determination of therapeutic potential of luteolin for Philadelphia chromosome positive acute lymphoblastic leukaemia cells | Gürler, Sevim Beyza; Baran, Yusuf ; Kiraz, Yağmur |
| 2020 | Determining element accumulations in Turkish red pine used as a bioindicator for estimating of existing pollution on both sides of Bosphorus in İstanbul | Yalçın, İbrahim Ertuğrul; Özyiğit, İbrahim İlker; Doğan, İlhan ; Demir, Göksel; Yarcı, Celal |
| Dec-2013 | Determining the C-terminal amino acid of a peptide from MS/MS data | Allmer, Jens |
| 1-Nov-2015 | Development of a SNP-based CAPS assay for the Me1 gene conferring resistance to root knot nematode in pepper | Uncu, Ali Tevfik; Çelik, İbrahim; Devran, Zübeyir; Frary, Anne ; Frary, Amy; Doğanlar, Sami |
| Nov-2022 | Development of AB3-type novel phthalocyanine and porphyrin photosensitizers conjugated with triphenylphosphonium for higher photodynamic efficacy | Önal, Emel; Tüncel, Özge ; Erdoğan, İpek ; Albakour, Mohamad; Gümüşgöz Çelik, Gizem; Küçük, Tuǧba; Akgül, Bünyamin ; Gürek, Ayşe Gül; Özçelik, Serdar |
| Jun-2013 | Development of EST-SSR markers for diversity and breeding studies in opium poppy | Şelale, Hatice ; Çelik, İbrahim; Gültekin, Visam; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne |
| Feb-2017 | Development of genomic simple sequence repeat markers in faba bean by next-generation sequencing | Abuzayed, Mazen A.; Göktay, Mehmet ; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne |
| Aug-2014 | Development of genomic simple sequence repeat markers in opium poppy by next-generation sequencing | Çelik, İbrahim; Gültekin, Visam; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne |
| Apr-2022 | Development of liposomal formulations of the eggplant glycoalkaloids solasonine and solamargine | Tatlıdil, Engin ; Gürbüz, Nergiz ; Doğanlar, Sami ; Frary, Anne |
| Jan-2008 | Development of practical HPLC methods for the separation and determination of eggplant steroidal glycoalkaloids and their aglycones | Eanes, Ritchie C. ; Tek, Neslihan ; Kırsoy, Öyküm; Frary, Anne ; Doğanlar, Sami ; Almeida, Adelia E. |
| 2018 | Development of simple sequence repeat markers in hazelnut (Corylus avellana L.) by next-generation sequencing and discrimination of Turkish hazelnut cultivars | Özturk, Süleyman Can; Göktay, Mehmet ; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne |
| Jan-2020 | Development of tomato plants over-expressing cytokinin synthesis gene and characterization by proteomic approach | Şelale, Hatice |
| 2013 | Diagnostic and therapeutic potentials of expression levels of bioactive sphingolipid genes in newly diagnosed and drug-resistant chronic myeloid leukemia patients | Baran, Yusuf ; Yandım, Melis; Kozanoğlu, İlknur; Özdoğu, Hakan; Pişkin, Özden; Özcan, Mehmet Ali |
| 2021 | A diaminoethane motif bearing low molecular weight polymer as a new nucleic acid delivery agent | Zelcak, Aykut; Ünal, Yağmur Ceren ; Meşe, Gülistan ; Bulmuş, Volga |
| 2009 | Dietary garlic prevents development of diabesity in mice | Tu, Chen-Pei David; Akgül, Bünyamin ; Lin, Kai-Wei; Pan, Huei-Ju; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Yuan-Tsong |
| 2011 | Dietary garlic prevents development of or alleviates diabetes and obesity in mice | Tu, Chen-Pei David; Yang, Hui-Mei Ou; Lin, Kai-Wei; Akgül, Bünyamin ; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Yuan-Tsong |
| 2013 | Differential changes in cell shape on nanopatterned surfaces for normal and cancer cells | Özdil, B.; Horzum, U.; Okvur, Devrim Pesen |
| 2016 | Differential expression of toxoplasma gondii microRNAs in murine and human hosts | Saçar Demirci, Müşerref Duygu; Bağcı, Caner; Allmer, Jens |
| 2022 | Differential susceptibility to senescence in CART cells based on co-stimulatory signaling | Can, İsmail; Sakemura, Reona Leo; Manriquez-Roman, Claudia; Sirpilla, Olivia; Stewart, Carli M.; Yun, Kun; Cox, Michelle J.; Ekiz, Atakan |
| Nov-2017 | Differentially expressed tRNA-derived small RNAs co-sediment primarily with non-polysomal fractions in Drosophila | Göktaş, Çağdaş; Yiğit, Hatice; Coşacak, Mehmet İlyas; Akgül, Bünyamin |
| 12-Aug-2015 | Differentiation of normal and cancer cell adhesion on custom designed protein nanopatterns | Horzum, Utku; Özdil, Berrin; Pesen Okvur, Devrim |
| 2015 | Discovering alternative targets in chronic myeloid leukemia (CML): determination of expression levels of bioactive sphingolipid genes in newly diagnosed and drug-resistant CML patients | Kartal Yandım, Melis; Kozanoğlu, İlknur; Özdoğu, Hakan; Pişkin, Özden; Özcan, Mehmet Ali; Baran, Yusuf |
| 2017 | Distinguishing between MicroRNA targets from diverse species using sequence motifs and K-mers | Yousef, Malik; Khalifa, Waleed; Acar, İlhan Erkin ; Allmer, Jens |
| Oct-2013 | Distribution of some elements in Veronica scutellata L. from Bolu, Turkey: Soil-plant interactions | Özyiğit, İbrahim İlker; Doğan, İlhan ; Demir, G.; Eskin, B.; Keskin, M.; Yalçın, İbrahim Ertuğrul |
| 2020 | DNMSO; an ontology for representing de novo sequencing results from Tandem-MS data | Takan, Savaş ; Allmer, Jens |
| Jun-2009 | Docetaxel enhances the cytotoxic effects of imatinib on Philadelphia positive human chronic myeloid leukemia cells | Güçlüler, Gözde; Baran, Yusuf |
| Feb-2009 | Docetaxel/zoledronic acid combination triggers apoptosis synergistically through downregulating antiapoptotic Bcl-2 protein level in hormone-refractory prostate cancer cells | Karabulut, B.; Erten, C.; Gül, M. K.; Cengiz, E.; Karaca, B.; Küçükzeybek, Y.; Görümlü, G.; Atmaca, H.; Uzunoğlu, S.; Şanlı, U. A.; Baran, Yusuf ; Uslu, R. |
| 2015 | Doksorubisin ilaç dirençlilik mekanizmalarının genomik yöntemlerle tespit edilmesi | Koç, Ahmet ; Demir, Ayşe Banu |
| 2018 | Domates (Solanum lycopersicum L.)’te birincil ve ikincil metabolitler ve anahtar enzimler için kantitatif karakter lokus analizleri | Doğanlar, Sami ; Frary, Anne |
| 2008 | Domateste (Lycopersicon esculentum) tuza dayanıklılığın fizyolojik ve genetik karakterizasyonu | Doğanlar, Sami ; Frary, Anne ; Keleş, Davut; Pınar, Hasan; Göl, Deniz |
| 2019 | Ecophysiological properties of Turkish endemic Centaurea consanguinea DC. | Eskin, Bülent; Özyiğit, İbrahim İlker; Doğan, İlhan ; Demir, Göksel; Yarcı, Celal; Serin, Memduh |
| 2011 | Effect of biopolymers containing natamycin against Aspergillus niger and Penicillium roquefortii on fresh kashar cheese | Türe, Hasan; Eroğlu, Erdal; Özen, Banu ; Soyer, Ferda |
| Jul-2011 | Effect of cobalt-60 (? radiation) on multidrug-resistant multiple myeloma cell lines | Mutlu, Pelin; Baran, Yusuf ; Ural, Ali Ugur; Avcu, Ferit; Dirican, Bahar; Beyzadeoglu, Murat; Gündüz, Ufuk |
