| Issue Date | Title | Author(s) |
| 2022 | 44 Current Challenges in miRNomics | Akgül, Bünyamin ; Stadler, Peter F.; Hawkins, Liam J.; Hadj-Moussa, Hanane; Storey, Kenneth B.; Ergin, Kemal; Allmer, Jens |
| Nov-2012 | Aggregatibacter actinomycetemcomitans GroEL Protein Promotes Conversion of Human CD4+ T Cells into IFN gamma IL10 Producing Tbet+ Th1 Cells | Saygılı, Tahsin; Akıncılar, Semih Can; Akgül, Bünyamin ; Nalbant Aldanmaz, Ayten |
| 2012 | Analysis of temporal and spatial expression of drosophila embryonic small RNAs by deep-sequencing method | Coşacak, Mehmet İlyas |
| Dec-2019 | Analysis of TNFRSF10B-As long-noncoding RNA's effects on various cancer cell properties | Alkan, Ayşe Hale |
| 2018 | Anti-apoptotik GTF2A1-AS uzun kodlamayan RNA’sının hücreiçi konumunun ve etkileştiği komplekslerin tanımlanması | Akgül, Bünyamin |
| May-2023 | Biochemical and functional characterization of circular RNAs differentially expressed in cisplatin-treated HeLa cells | Yaylak, Bilge |
| 2009 | Cloning of polysome-associated small RNAs in Drosophila melanogaster embryos | Yiğit, Hatice |
| 2022 | Cytoplasmically localized tRNA-derived fragments inhibit translation in Drosophila S2 cells | Hamid, Syed Muhammad; Akgül, Bünyamin |
| 2018 | Deep sequencing reveals two Jurkat subpopulations with distinct miRNA profiles during camptothecin-induced apoptosis | Erdoğan, İpek ; Coşacak, Mehmet İlyas; Nalbant, Ayten ; Akgül, Bünyamin |
| Nov-2022 | Development of AB3-type novel phthalocyanine and porphyrin photosensitizers conjugated with triphenylphosphonium for higher photodynamic efficacy | Önal, Emel; Tüncel, Özge ; Erdoğan, İpek ; Albakour, Mohamad; Gümüşgöz Çelik, Gizem; Küçük, Tuǧba; Akgül, Bünyamin ; Gürek, Ayşe Gül; Özçelik, Serdar |
| 2009 | Dietary garlic prevents development of diabesity in mice | Tu, Chen-Pei David; Akgül, Bünyamin ; Lin, Kai-Wei; Pan, Huei-Ju; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Yuan-Tsong |
| 2011 | Dietary garlic prevents development of or alleviates diabetes and obesity in mice | Tu, Chen-Pei David; Yang, Hui-Mei Ou; Lin, Kai-Wei; Akgül, Bünyamin ; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Yuan-Tsong |
| Nov-2017 | Differentially expressed tRNA-derived small RNAs co-sediment primarily with non-polysomal fractions in Drosophila | Göktaş, Çağdaş; Yiğit, Hatice; Coşacak, Mehmet İlyas; Akgül, Bünyamin |
| 2015 | Endogenous heat shock protein GroEL of A. actinomycetemcomitans preferentially targets primary human CD8+T cells | Kant, Melis; Akgül, Bünyamin ; Nalbant Aldanmaz, Ayten |
| 2022 | Endogenous miRNA Sponges | Alkan, Ayşe Hale; Akgül, Bünyamin |
| 2022 | Epitranscriptomics changes the play: m6A RNA modifications in apoptosis | Akçaöz, Azime ; Akgül, Bünyamin |
| 2024 | Epitranscriptomics m6A analyses reveal distinct m6A marks under tumor necrosis factor α (TNF-α)-induced apoptotic conditions in HeLa cells | Akçaöz Alasar, Azime; Tuncel, Özge ; Sağlam, Buket; Gazaloğlu, Yasemin; Atbinek, Melis; Çağıral, Umut; İşcan, Evin; Özhan, Güneş ; Akgül, Bünyamin |
| 2024 | Epitranscriptomics m<SUP>6</SUP>A analyses reveal distinct m<SUP>6</SUP>A marks under tumor necrosis factor α (TNF-α)-induced apoptotic conditions in HeLa cells | Akçaöz Alasar, Azime; Tüncel, Özge ; Sağlam, Buket; Gazaloğlu, Yasemin; Atbinek, Melis; Çağıral, Umut; Akgül, Bünyamin |
| Sep-2002 | Evidence for a stabilizer element in the untranslated regions of Drosophila glutathione S-transferase D1 mRNA | Akgül, Bünyamin ; Tu, Chen-Pei D. |
| Jul-2022 | Examination of stable intronic sequence RNA profile under apoptotic conditions | Kara, Merve |
| 2022 | Experimental MicroRNA Detection Methods | Yaylak, Bilge; Akgül, Bünyamin |
| 2010 | Garlic accelerates red blood cell turnover and splenic erythropoietic gene expression in mice: Evidence for erythropoietin-independent erythropoiesis | Akgül, Bünyamin ; Lin, Kai-Wei; Yang, Hui-Mei Ou; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Chien-Hsiun; Kikuchi, Tateki; Chen, Yuan-Tsong; Tu, Chen-Pei D. |
| 2019 | Gen ifadesinin yeni düzenleyicileri halkasal RNA’ların apoptotik yolaklara olan etkilerinin araştırılması | Akgül, Bünyamin ; Aldanmaz, Ayten Nalbant ; Allmer, Jens |
| 2014 | Gene reporter assay to validate microRNA targets in drosophila S2 cells | Akgül, Bünyamin ; Göktaş, Çağdaş |
| Dec-2022 | Genomewide m6A mapping uncovers dynamic changes in the m6A epitranscriptome of cisplatin-treated apoptotic HeLa cells | Akçaöz, Azime ; Tüncel, Özge ; Gelmez, Ayşe Bengisu; Sağlam, Buket; Erdoğan Vatansever, İpek ; Akgül, Bünyamin |
| 2008 | Genomic profiling of microRNAs regulating translation in drosophila melanogaster embryos | Tüncel, Özge |
| 2010 | Genomik profilleme yöntemiyle T lenfositlerinde apoptozu düzenleyen mikroRNA' ların tanımlanması | Akgül, Bünyamin ; Nalbant Aldanmaz, Ayten ; Yiğit, Hatice |
| 2013 | Identification of complexes that interact with tRNA-derived small RNAs by gene expression methods | Öztürk, Saniye Elvan |
| Dec-2015 | Identification of long non-coding RNAs that regulate apoptosis in human | Ahmadov, Ulvi |
| 2008 | Identification of microRNAs involved in camptothecin-induced apoptosis in Jurkat T cell line | Erdoğan, İpek |
| 2016 | The importance of miRNA expressions in Infertilty | Gökalp, S.; Akgül, Bünyamin ; Özçakır, T.; Vatansever, H. S. |
| Jul-2018 | Indentification of circular ribonucleic acids differentially expressed in apoptotic HeLa cells | Yaylak, Bilge |
| 2018 | Intracytoplasmic re-localization of miRISC complexes | Akgül, Bünyamin ; Erdoğan, İpek |
| Jul-2022 | Investigation of long non-coding RNA and chromatin interactions in HeLa cells | Atbinek, Melis |
| Jul-2020 | Investigation of the effect of DR5-AS long non-coding RNA on cell proliferation | Gürer, Dilek Cansu |
| Dec-2022 | Investigation of the effects of GTF2A1-antisense long non-coding RNA on cell fate | Çiftçi, Yusuf Cem |
| 2012 | Investigation of the functions of candidate miRNAs in camptothecin-induced apoptosis in human cells | Demir, Şeyda |
| Jun-2022 | Investigation of the interaction between DR5-AS long noncoding RNA and CAPRIN1 protein | Kaçar, Vahide İlayda |
| 2011 | Investigation of tRNA-derived small RNAs in drosophila melangaster | Göktaş, Çağdaş |
| 2016 | İnsanda apoptozu düzenleyen uzun kodlamayan RNA’ların belirlenmesi ve fonksiyonel karakterizasyonu | Akgül, Bünyamin |
| Dec-2022 | Knockdown of death receptor 5 antisense long noncoding RNA and cisplatin treatment modulate similar macromolecular and metabolic changes in HeLa cells | Gürer, Dilek Cansu; Erdoğan Vatansever, İpek ; Ceylan, Çağatay ; Akgül, Bünyamin |
| 2023 | Long noncoding RNAs in human cancer and apoptosis | Erdoğan, İpek ; Sweef, Osama; Akgül, Bünyamin |
| 2014 | Master regulators of posttranscriptional gene expression are subject to regulation | Hamid, Syed Muhammad; Akgül, Bünyamin |
| Dec-2019 | Molecular characterization of long non coding RNAs that mediate apoptosis in human | Sweef, Osama Abdel Hady Biaomy |
| Dec-2017 | Molecular characterization of the GTF2A-1 antisense long non-coding RNA | Yarımçam, Murat Caner |
| 2008 | mRNA decay analysis in Drosophila melanogaster: Drug-induced changes in glutathione S-transferase D21 mRNA stability | Akgül, Bünyamin ; Tu, Chen-Pei D. |
| 2022 | Noncoding RNAs in apoptosis: identification and function | Tüncel, Özge ; Kara, Merve; Yaylak, Bilge; Erdoğan, İpek ; Akgül, Bünyamin |
| 2023 | Noncoding RNAs: A new layer of functional RNAs | Gürer, Dilek Cansu; Akgül, Bünyamin |
| 2024 | An Overview of Current Detection Methods for RNA Methylation | Saglam, Buket; Akgul, Bunyamin |
| Feb-2004 | Pentobarbital-mediated Regulation of Alternative Polyadenylation in Drosophila Glutathione S-Transferase D21 mRNAs | Akgül, Bünyamin ; Tu, Chen-Pei D. |
| Feb-2018 | Re-arrangements in the cytoplasmic distribution of small RNAs following the maternal-to-zygotic transition in Drosophila embryos | Coşacak, Mehmet İlyas; Yiğit, Hatice; Kızıl, Çağhan; Akgül, Bünyamin |
| Mar-2007 | Regulation of mRNA stability through a pentobarbital-responsive element | Akgül, Bünyamin ; Tu, Chen-Pei D. |
| Apr-2018 | Small RNA data set that includes tRNA-derived fragments from Jurkat cells treated with camptothecin | Coşacak, Mehmet İlyas; Erdoğan, İpek ; Nalbant, Ayten ; Akgül, Bünyamin |
| 2019 | Transcriptomics analysis of circular RNAs differentially expressed in apoptotic HeLa cells | Yaylak, Bilge; Erdoğan, İpek ; Akgül, Bünyamin |
| 2021 | Transcriptomics profiling identifies cisplatin-inducible death receptor 5 antisense long non-coding RNA as a modulator of proliferation and metastasis in HeLa cells | Gürer, Dilek Cansu; Erdoğan, İpek ; Ahmadov, Ulvi; Başol, Merve; Sweef, Osama; Çakan Akdoğan, Gülçin; Akgül, Bünyamin |
| Dec-2021 | Transcriptomics profiling of m6A RNA modifications in TNF-alpha induced apoptosis | Akçaöz, Azime |
| 2014 | tRNA'lardan kökenlenen küçük RNA fragmanlarının etkileştiği komplekslerin tanımlanması ve gelişim üzerine etkilerinin araştırılması | Akgül, Bünyamin ; Nalbant Aldanmaz, Ayten |
