Please use this identifier to cite or link to this item: https://hdl.handle.net/11147/2277
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dc.contributor.authorAkgül, Bünyamin-
dc.contributor.authorTu, Chen-Pei D.-
dc.date.accessioned2016-10-19T07:21:28Z
dc.date.available2016-10-19T07:21:28Z
dc.date.issued2007-03
dc.identifier.citationAkgül, B., and Tu, C. P. D. (2007). Regulation of mRNA stability through a pentobarbital-responsive element. Archives of Biochemistry and Biophysics, 459(1), 143-150. doi:10.1016/j.abb.2006.10.026en_US
dc.identifier.issn0003-9861
dc.identifier.issn0003-9861-
dc.identifier.urihttp://doi.org/10.1016/j.abb.2006.10.026
dc.identifier.urihttp://hdl.handle.net/11147/2277
dc.description.abstractPentobarbital, a general anesthetic and non-genotoxic carcinogen, can induce gene expression by activating transcription. In the Drosophila glutathione S-transferase D21 (gstD21) gene, pentobarbital's regulatory influence extends to the level of mRNA turnover. Transcribed from an intronless gene, gstD21 mRNA is intrinsically very labile. But exposure to pentobarbital renders it stabilized beyond what can be attributed to transcriptional activation. We aim here to identify cis-acting element(s) of gstD21 mRNA as contributors to the molecule's pentobarbital-mediated stabilization. In the context of hsp70 5′UTR and the 3′UTR of act5C, gstD21 mRNA, minus its native UTRs, is stable. Maintaining the same context of heterologous UTRs, we can reconstitute using the full-length gstD21 sequence the inherent instability of gstD21 mRNA and its stabilization by pentobarbital. Transgenic flies that express these chimeric gstD21 mRNA exhibit decay intermediates lacking 3′UTR, which are not stabilized by PB treatment. The 3′UTR sequence, when inserted downstream from a reporter transcript, stabilizes it 1.6-fold under PB treatment. The analysis of the decay intermediates suggests a polysome-associated decay pattern. We propose a regulatory model that features a 59-nucleotide pentobarbital-responsive element (PBRE) in the 3′UTR of gstD21 mRNA.en_US
dc.description.sponsorshipNational Institute of Environmental Health Sciences (ES 02678)en_US
dc.language.isoenen_US
dc.publisherElsevier Ltd.en_US
dc.relation.ispartofArchives of Biochemistry and Biophysicsen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectHeat shocken_US
dc.subjectmRNA decayen_US
dc.subjectPentobarbitalen_US
dc.subjectPolysomeen_US
dc.titleRegulation of Mrna Stability Through a Pentobarbital-Responsive Elementen_US
dc.typeArticleen_US
dc.authoridTR37475en_US
dc.institutionauthorAkgül, Bünyamin-
dc.departmentİzmir Institute of Technology. Molecular Biology and Geneticsen_US
dc.identifier.volume459en_US
dc.identifier.issue1en_US
dc.identifier.startpage143en_US
dc.identifier.endpage150en_US
dc.identifier.wosWOS:000244846600018en_US
dc.identifier.scopus2-s2.0-33847105532en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.doi10.1016/j.abb.2006.10.026-
dc.identifier.pmid17234150en_US
dc.relation.doi10.1016/j.abb.2006.10.026en_US
dc.coverage.doi10.1016/j.abb.2006.10.026en_US
dc.identifier.wosqualityQ1-
dc.identifier.scopusqualityQ2-
item.fulltextWith Fulltext-
item.openairetypeArticle-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.grantfulltextopen-
item.languageiso639-1en-
item.cerifentitytypePublications-
crisitem.author.dept04.03. Department of Molecular Biology and Genetics-
Appears in Collections:Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik
PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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