Please use this identifier to cite or link to this item:
https://hdl.handle.net/11147/10450
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Özdemir, Özgün O. | tr |
dc.contributor.author | Soyer, Ferda | tr |
dc.date.accessioned | 2021-01-24T18:43:13Z | - |
dc.date.available | 2021-01-24T18:43:13Z | - |
dc.date.issued | 2020 | - |
dc.identifier.issn | 2470-1343 | - |
dc.identifier.uri | https://doi.org/10.1021/acsomega.0c00703 | - |
dc.identifier.uri | https://hdl.handle.net/11147/10450 | - |
dc.description.abstract | Pseudomonas aeruginosa, a widely distributed opportunistic pathogen, is an important threat to human health for causing serious infections worldwide. Due to its antibiotic resistance and virulence factors, it is so difficult to combat this bacterium; thus, new antimicrobial agents are in search. 3-Hydroxyphenylacetic acid (3-HPAA), which is a phenolic acid mostly found in olive oil wastewater, can be a promising candidate with its dose-dependent antimicrobial properties. Elucidating the molecular mechanism of action is crucial for future examinations and the presentation of 3-HPAA as a new agent. In this study, the antimicrobial activity of 3-HPAA on P. aeruginosa and its action mechanism was investigated via shot-gun proteomics. The data, which are available via ProteomeXchange with identifier PXDO16243, were examined by STRING analysis to determine the interaction networks of proteins. KEGG Pathway enrichment analysis via the DAVID bioinformatics tool was also performed to investigate the metabolic pathways that undetected and newly detected groups of the proteins. The results displayed remarkable changes after 3-HPAA exposure in the protein profile of P. aeruginosa related to DNA replication and repair, RNA modifications, ribosomes and proteins, cell envelope, oxidative stress, as well as nutrient availability. 3-HPAA showed its antimicrobial action on P. aeruginosa by affecting multiple bacterial processes; hence, it could be categorized as a multitarget antimicrobial agent. | en_US |
dc.description.sponsorship | Izmir Institute of Technology Research Fund [2014IYTE22] | en_US |
dc.description.sponsorship | The authors thank Prof. Dr. Talat Yalcin for generously providing his expertise and support for LC-ESI-MS/MS and MASCOT analyses. This work was funded by the Izmir Institute of Technology Research Fund (Project #2014IYTE22) to F.S., and a Ph.D. grant to O.O.O. by the Izmir Institute of Technology. The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE<SUP>86,87</SUP> partner repository. | en_US |
dc.language.iso | en | en_US |
dc.publisher | American Chemical Society | en_US |
dc.relation.ispartof | ACS Omega | en_US |
dc.rights | info:eu-repo/semantics/openAccess | en_US |
dc.title | Pseudomonas aeruginosa presents multiple vital changes in its proteome in the presence of 3-hydroxyphenylacetic acid, a promising antimicrobial agent | en_US |
dc.type | Article | en_US |
dc.institutionauthor | Özdemir, Özgün O. | tr |
dc.institutionauthor | Soyer, Ferda | tr |
dc.department | İzmir Institute of Technology. Molecular Biology and Genetics | en_US |
dc.identifier.volume | 5 | en_US |
dc.identifier.issue | 32 | en_US |
dc.identifier.startpage | 19938 | en_US |
dc.identifier.endpage | 19951 | en_US |
dc.identifier.wos | WOS:000563015100003 | en_US |
dc.identifier.scopus | 2-s2.0-85090988898 | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | tr |
dc.identifier.doi | 10.1021/acsomega.0c00703 | - |
dc.identifier.pmid | 32832748 | en_US |
dc.relation.doi | 10.1021/acsomega.0c00703 | en_US |
dc.coverage.doi | 10.1021/acsomega.0c00703 | en_US |
dc.identifier.wosquality | Q2 | - |
dc.identifier.scopusquality | Q2 | - |
item.fulltext | With Fulltext | - |
item.grantfulltext | open | - |
item.languageiso639-1 | en | - |
item.openairecristype | http://purl.org/coar/resource_type/c_18cf | - |
item.cerifentitytype | Publications | - |
item.openairetype | Article | - |
crisitem.author.dept | 04.03. Department of Molecular Biology and Genetics | - |
Appears in Collections: | Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection |
Files in This Item:
File | Size | Format | |
---|---|---|---|
acsomega.0c00703.pdf | 4.56 MB | Adobe PDF | View/Open |
CORE Recommender
SCOPUSTM
Citations
11
checked on Nov 15, 2024
WEB OF SCIENCETM
Citations
10
checked on Nov 9, 2024
Page view(s)
256
checked on Nov 18, 2024
Download(s)
102
checked on Nov 18, 2024
Google ScholarTM
Check
Altmetric
Items in GCRIS Repository are protected by copyright, with all rights reserved, unless otherwise indicated.