Please use this identifier to cite or link to this item: https://hdl.handle.net/11147/5755
Title: High resolution map of eggplant (Solanum melongena) reveals extensive chromosome rearrangement in domesticated members of the Solanaceae
Authors: Doğanlar, Sami
Frary, Amy
Daunay, Marie Christine
Huvenaars, Koen H J
Mank, Rolf A.
Frary, Anne
Doğanlar, Sami
Frary, Anne
Izmir Institute of Technology. Molecular Biology and Genetics
Keywords: AFLPs
Chromosome rearrangement
Comparative linkage map
Molecular markers
Solanum melongena
Issue Date: Jul-2014
Publisher: Springer Verlag
Source: Doǧanlar, S., Frary, A., Daunay, M.-C., Huvenaars, K., Mank, R., and Frary, A. (2014). High resolution map of eggplant (Solanum melongena) reveals extensive chromosome rearrangement in domesticated members of the Solanaceae. Euphytica, 198(2), 231-241. doi:10.1007/s10681-014-1096-2
Abstract: A linkage map of eggplant was constructed for an interspecific F2 population derived from a cross between Solanum linnaeanum MM195 and S. melongena MM738. The map contains 400 AFLP® (amplified fragment length polymorphism), 348 RFLP (restriction fragment length polymorphism) and 116 COSII (conserved ortholog set) markers. The 864 mapped markers encompass 12 linkage groups, span 1,518 cM and are spaced at an average interval of 1.8 cM. Use of orthologous markers allowed confirmation of the established syntenic relationships between eggplant and tomato chromosomes and helped delineate the nature of the 33 chromosomal rearrangements and 11 transpositions distinguishing the two species. This genetic map provides a 2- to 3-fold improvement in marker density compared to previously published interspecific maps. Because the interspecific mapping population is rich in morphological variation, this greater genome saturation will be useful for QTL (quantitative trait locus) analyses. The recent release of the tomato genome sequence will provide additional opportunities for exploiting this map for comparative genomics and crop improvement.
URI: https://doi.org/10.1007/s10681-014-1096-2
http://hdl.handle.net/11147/5755
ISSN: 0014-2336
Appears in Collections:Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection

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