Browsing by Author Allmer, Jens

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Issue DateTitleAuthor(s)
2009Enabling the quantitation of post translational modificationsAllmer, Jens
Dec-2016Enhancement and validation of current human genome annotation via novel proteogenomics algorithmsHas, Canan
Sep-2014EPO mediates neurotrophic, neuroprotective, anti-oxidant, and anti-apoptotic effects via downregulation of miR-451 and miR-885-5p in SH-SY5Y neuron-like cellsAlural, Begüm; Duran, Gizem Ayna; Tüfekçi, Kemal Uğur; Allmer, Jens; Onkal, Zeynep; Tunalı, Doğa; Genç, Kürşad; Genç, Şermin
2011Evaluation of protein secondary structure prediction algorithms on a new advanced benchmark datasetHas, Canan
Jan-2012Existing bioinformatics tools for the quantitation of post-translational modificationsAllmer, Jens
2011Exploiting fragment-ion complementarity for peptide de novo sequencing from collision induced dissociation tandem mass spectraAytun, Belgin
Jan-2018The expressed MicroRNA-mRNA interactions of Toxoplasma gondiiAcar, İlhan Erkin; Saçar Demirci, Müşerref Duygu; Groß, Uwe; Allmer, Jens
2016Feature selection for microRNA target prediction comparison of one-class feature selection methodologiesYousef, Malik; Allmer, Jens; Khalifa, Waleed
2016Feature selection has a large impact on one-class classification accuracy for micrornas in plantsYousef, Malik; Demirci, Müşerref Duygu Saçar; Khalifa, Waleed; Allmer, Jens
2015Genomic simple sequence repeat markers reveal patterns of genetic relatedness and diversity in sesameUncu, Ayşe Özgür; Gültekin, Visam; Allmer, Jens; Frary, Anne ; Doğanlar, Sami 
2016The impact of feature selection on one and two-class classification performance for plant microRNAsKhalifa, Waleed; Yousef, Malik; Saçar Demirci, Müşerref Duygu; Allmer, Jens
Dec-2016Importance of database normalization for reliable protein identification in mass spectrometry-based proteomicsMungan, Mehmet Direnç
2017Improving the Quality of Positive Datasets for the Establishment of Machine Learning Models for pre-microRNA DetectionDemirci, Müşerref Duygu Saçar; Allmer, Jens
2013An integrative data mining approach for microRNA detection in humanSaçar, Müşerref Duygu
Sep-2014Intersection of MicroRNA and gene regulatory networks and their implication in cancerYousef, Malik; Trinh, Hung V.; Allmer, Jens
2009Label-free quantitation with 2DBAllmer, Jens
Apr-2010Label-free quantitation, an extension to 2DBAllmer, Jens
Jul-2015A lattice-based approach for news chain constructionToprak, Mustafa
28-May-2015Lithium protects against paraquat neurotoxicity by NRF2 activation and miR-34a inhibition in SH-SY5Y cellsAlural, Begüm; Özerdem, Ayşegül; Allmer, Jens; Genç, Kürşad; Genç, Şermin
2016A Machine Learning Approach for MicroRNA Precursor Prediction in Retro-transcribing Virus GenomesDemirci, Müşerref Duygu Saçar; Toprak, Mustafa; Allmer, Jens