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Characterization of two genes encoding metal tolerance proteins from Beta vulgaris subspecies maritima that confers manganese tolerance in yeast 

Erbaşol, Işıl; Bozdağ, Gönensin Ozan; Koç, Ahmet; Pedas, Pia; Karakaya, Hüseyin Çağlar (Springer, 2013)
Manganese (Mn2+) is an essential micronutrient in plants. However increased Mn2+ levels are toxic to plant cells. Metal tolerance proteins (MTPs), member of cation diffusion facilitator protein (CDF) family, have important ...
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Evidence for a stabilizer element in the untranslated regions of Drosophila glutathione S-transferase D1 mRNA 

Akgül, Bünyamin; Tu, Chen-Pei D. (American Society for Biochemistry and Molecular Biology, 2002-09)
The neighboring genes gstD1 and gstD21 share 70% sequence identity, gstD1 encodes a 1,1,1-trichloro-2,2-bis-(P-chlorophenyl)ethane dehydrochlorinase; gstD21, a ligandin. Both of their mRNAs are inducible by pentobarbital ...
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Checkpoint deficient rad53-11 yeast cannot accumulate dNTPs in response to DNA damage 

Koç, Ahmet; Merrill, Gary F. (Elsevier, 2007-02)
Deoxyribonucleotide pools are maintained at levels that support efficient and yet accurate DNA replication and repair. Rad53 is part of a protein kinase regulatory cascade that, conceptually, promotes dNTP accumulation in ...
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Identification of a novel system for boron transport: Atr1 is a main boron exporter in yeast 

Kaya, Alaattin; Karakaya, Hüseyin Çağlar; Fomenko, Dmitri E.; Gladyshev, Vadim N.; Koç, Ahmet (American Society for Microbiology, 2009-07)
Boron is a micronutrient in plants and animals, but its specific roles in cellular processes are not known. To understand boron transport and functions, we screened a yeast genomic DNA library for genes that confer resistance ...
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tRNA wobble base modifications and boric acid resistance in yeast: Boron-resistant deletion mutants induce the general amino acid control mechanism and activate boron efflux 

Uluışık, İrem; Karakaya, Hüseyin Çağlar; Koç, Ahmet (Springer, 2020-05)
Boric acid is essential for plants and has many vital roles in animals and microorganisms. However, its high doses are toxic to all organisms. We previously screened yeast deletion collections to identify boric acid-resistant ...
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Identification of respiratory chain gene mutations that shorten replicative life span in yeast 

Hacıoğlu, Elise; Demir, Ayşe Banu; Koç, Ahmet (Elsevier, 2012-02)
Aging is the progressive accumulation of alterations in cells that elevates the risk of death. The mitochondrial theory of aging postulates that free radicals produced by the mitochondrial respiratory system contribute to ...
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Compartmentalization and regulation of mitochondrial function by methionine sulfoxide reductases in yeast 

Kaya, Alaattin; Koç, Ahmet; Lee, Byung Cheon; Fomenko, Dmitri E.; Rederstorff, Mathieu; Krol, Alain; Lescure, Alain; Gladyshev, Vadim N. (American Chemical Society, 2010-10)
Elevated levels of reactive oxygen species can damage proteins. Sulfur-containing amino acid residues, cysteine and methionine, are particularly susceptible to such damage. Various enzymes evolved to protect proteins or ...
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Characterization of a cDNA from Beta maritima that confers nickel tolerance in yeast 

Bozdaǧ, Gönensin Ozan; Kaya, Alaattin; Koç, Ahmet; Noll, Gundula A.; Prüfer, Dirk; Karakaya, Hüseyin Çaǧlar (Elsevier, 2014-04)
Nickel is an essential micronutrient due to its involvement in many enzymatic reactions as a cofactor. However, excess of this element is toxic to biological systems. Here, we constructed a cDNA library from Beta maritima ...
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The roles of thiol oxidoreductases in yeast replicative aging 

Hacıoğlu, Elise; Esmer, Işıl; Fomenko, Dmitri E.; Gladyshev, Vadim N.; Koç, Ahmet (Elsevier, 2010-11)
Thiol-based redox reactions are involved in the regulation of a variety of biological functions, such as protection against oxidative stress, signal transduction and protein folding. Some proteins involved in redox regulation ...
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Genome-wide identification of genes that play a role in boron stress response in yeast 

Uluışık, İrem; Kaya, Alaattin; Ünlü, Ercan Selçuk; Avşar, Kadir; Karakaya, Hüseyin Çağlar; Yalçın, Talat; Koç, Ahmet (Elsevier BV., 2011-02)
Boron is an essential micronutrient for plants and it is either necessary or beneficial for animals. Studies identified only few genes related to boron metabolism thus far and details of how boron is imported into cells ...
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AuthorKoç, Ahmet (10)Karakaya, Hüseyin Çağlar (5)Kaya, Alaattin (4)Fomenko, Dmitri E. (3)Gladyshev, Vadim N. (3)Uluışık, İrem (3)Bozdağ, Gönensin Ozan (2)Hacıoğlu, Elise (2)Akgül, Bünyamin (1)Avşar, Kadir (1)... View MoreSubject
Yeast (11)
Boron (4)Boric acid (3)Aging (2)Mitochondria (2)Amino acids (1)Antioxidant (1)ATR1 (1)ATR1 gene (1)Beta maritima (1)... View MorePublication Type
article (11)
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Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı (11)
Access Typeinfo:eu-repo/semantics/openAccess (10)info:eu-repo/semantics/closedAccess (1)Date Issued2010 - 2020 (8)2002 - 2009 (3)Full TextYes (11)

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