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Effects of deleting mitochondrial antioxidant genes on life span 

Ünlü, Ercan Selçuk; Koç, Ahmet (Wiley, 2007-04)
Reactive oxygen species (ROS) damage biomolecules, accelerate aging, and shorten life span, whereas antioxidant enzymes mitigate these effects. Because mitochondria are a primary site of ROS generation and also a primary ...
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Methionine sulfoxide reduction and the aging process 

Koç, Ahmet; Gladyshev, Vadim N. (Wiley, 2007-04)
Aging has been described for multicellular and asymmetrically dividing organisms, but the mechanisms are poorly understood. Oxidation of proteins is considered to be one of the major factors that leads to aging. Oxidative ...
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Genome-wide identification of genes that play a role in boron stress response in yeast 

Uluışık, İrem; Kaya, Alaattin; Ünlü, Ercan Selçuk; Avşar, Kadir; Karakaya, Hüseyin Çağlar; Yalçın, Talat; Koç, Ahmet (Elsevier BV., 2011-02)
Boron is an essential micronutrient for plants and it is either necessary or beneficial for animals. Studies identified only few genes related to boron metabolism thus far and details of how boron is imported into cells ...
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Assessment of chronological lifespan dependent molecular damages in yeast lacking mitochondrial antioxidant genes 

Demir, Ayşe Banu; Koç, Ahmet (Elsevier, 2010-09)
The free radical theory of aging states that oxidative damage to biomolecules causes aging and that antioxidants neutralize free radicals and thus decelerate aging. Mitochondria produce most of the reactive oxygen species, ...
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Effect of thioredoxin deletion and p53 cysteine replacement on human p53 activity in wild-type and thioredoxin reductase null yeast 

Stoner, Christopher S.; Pearson, George D.; Koç, Ahmet; Merwin, Jason R.; Lopez, Nathan I.; Merrill, Gary Frederic (American Chemical Society, 2009)
Reporter gene transactivation by human p53 is inhibited in budding yeast lacking the TRR1 gene encoding thioredoxin reductase. To investigate the role of thioredoxin in controlling p53 activity, the level of reporter gene ...
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Characterization of two genes encoding metal tolerance proteins from Beta vulgaris subspecies maritima that confers manganese tolerance in yeast 

Erbaşol, Işıl; Bozdağ, Gönensin Ozan; Koç, Ahmet; Pedas, Pia; Karakaya, Hüseyin Çağlar (Springer, 2013)
Manganese (Mn2+) is an essential micronutrient in plants. However increased Mn2+ levels are toxic to plant cells. Metal tolerance proteins (MTPs), member of cation diffusion facilitator protein (CDF) family, have important ...
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Compartmentalization and regulation of mitochondrial function by methionine sulfoxide reductases in yeast 

Kaya, Alaattin; Koç, Ahmet; Lee, Byung Cheon; Fomenko, Dmitri E.; Rederstorff, Mathieu; Krol, Alain; Lescure, Alain; Gladyshev, Vadim N. (American Chemical Society, 2010-10)
Elevated levels of reactive oxygen species can damage proteins. Sulfur-containing amino acid residues, cysteine and methionine, are particularly susceptible to such damage. Various enzymes evolved to protect proteins or ...
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MsrB1 (methionine-R-sulfoxide reductase 1) knock-out mice: Roles of MsrB1 in redox regulation and identification of a novel selenoprotein form 

Fomenko, Dmitri E.; Novoselov, Sergey V.; Natarajan, Sathish Kumar; Lee, Byung Cheon; Koç, Ahmet; Carlson, Bradley A.; Lee, Tae- Hyung; Kim, Hwa-Young; Hatfield, Dolph L.; Gladyshev, Vadim N. (American Society for Biochemistry and Molecular Biology, 2009-02)
Protein oxidation has been linked to accelerated aging and is a contributing factor to many diseases. Methionine residues are particularly susceptible to oxidation, but the resulting mixture of methionine R-sulfoxide ...
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Functional analysis of free methionine-R-sulfoxide reductase from saccharomyces cerevisiae 

Le, Dung Tien; Lee, Byung Cheon; Marino, Stefano M.; Zhang, Yan; Fomenko, Dmitri E.; Kaya, Alaattin; Hacıoğlu, Elise; Kwak, Geun-Hee; Koç, Ahmet; Kim, Hwa-Young; Gladyshev, Vadim N. (American Society for Biochemistry and Molecular Biology, 2009-02)
Methionine sulfoxide reductases (Msrs) are oxidoreductases that catalyze thiol-dependent reduction of oxidized methionines. MsrA and MsrB are the best known Msrs that repair methionine S-sulfoxide (Met-S-SO) and ...
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Identification of respiratory chain gene mutations that shorten replicative life span in yeast 

Hacıoğlu, Elise; Demir, Ayşe Banu; Koç, Ahmet (Elsevier, 2012-02)
Aging is the progressive accumulation of alterations in cells that elevates the risk of death. The mitochondrial theory of aging postulates that free radicals produced by the mitochondrial respiratory system contribute to ...
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Gladyshev, Vadim N. (8)Fomenko, Dmitri E. (7)Kaya, Alaattin (7)Karakaya, Hüseyin Çağlar (6)Demir, Ayşe Banu (3)Hacıoğlu, Elise (3)Lee, Byung Cheon (3)Uluışık, İrem (3)Bozdağ, Gönensin Ozan (2)... View MoreSubjectYeast (9)Aging (6)Mitochondria (5)Saccharomyces cerevisiae (5)Boron (4)Reactive oxygen species (4)Antioxidant (2)Antioxidant genes (2)Boric acid (2)Chronological aging (2)... View MorePublication Type
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Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı (23)
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