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Deep sequencing reveals two Jurkat subpopulations with distinct miRNA profiles during camptothecin-induced apoptosis 

Erdoğan, İpek; Coşacak, Mehmet İlyas; Nalbant, Ayten; Akgül, Bünyamin (TUBITAK, 2018)
MicroRNAs (miRNAs) are small noncoding RNAs of about 19-25 nt that regulate gene expression posttranscriptionally under various cellular conditions, including apoptosis. The miRNAs involved in modulation of apoptotic events ...
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Small RNA data set that includes tRNA-derived fragments from Jurkat cells treated with camptothecin 

Coşacak, Mehmet İlyas; Erdoğan, İpek; Nalbant, Ayten; Akgül, Bünyamin (Elsevier, 2018-04)
In this article, we report a small RNA data set obtained from human T cell acute leukemia Jurkat cells, which were treated with the universal apoptotic agent camptothecin. Based on the Annexin-V labeling pattern, we sorted ...
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Re-arrangements in the cytoplasmic distribution of small RNAs following the maternal-to-zygotic transition in Drosophila embryos 

Coşacak, Mehmet İlyas; Yiğit, Hatice; Kızıl, Çağhan; Akgül, Bünyamin (MDPI, 2018-02)
Small ribonucleic acids (RNAs) are known to regulate gene expression during early development. However, the dynamics of interaction between small RNAs and polysomes during this process is largely unknown. To investigate ...
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Aggregatibacter actinomycetemcomitans GroEL Protein Promotes Conversion of Human CD4+ T Cells into IFNγ IL10 Producing Tbet+ Th1 Cells 

Saygılı, Tahsin; Akıncılar, Semih Can; Akgül, Bünyamin; Nalbant Aldanmaz, Ayten (Public Library of Science, 2012-11)
One of the heat shock family protein (Hsp) expressing bacteria is the gram negative, periodontal pathogen Aggregatibacter actinomycetemcomitans (Aa). A. actinomycetemcomitans' Hsp is a 64-kDa GroEL-protein, which has been ...
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Gene reporter assay to validate microRNA targets in drosophila S2 cells 

Akgül, Bünyamin; Göktaş, Çağdaş (Humana Press, 2014)
Bioinformatics programs have helped tremendously in identifying the targets of microRNAs, which are small noncoding RNAs that regulate gene expression posttranscriptionally. However, the partial complementarity between ...
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Garlic accelerates red blood cell turnover and splenic erythropoietic gene expression in mice: Evidence for erythropoietin-independent erythropoiesis 

Akgül, Bünyamin; Lin, Kai-Wei; Yang, Hui-Mei Ou; Chen, Yen-Hui; Lu, Tzu-Huan; Chen, Chien-Hsiun; Kikuchi, Tateki; Chen, Yuan-Tsong; Tu, Chen-Pei D. (Public Library of Science, 2010)
Garlic (Allium sativum) has been valued in many cultures both for its health effects and as a culinary flavor enhancer. Garlic's chemical complexity is widely thought to be the source of its many health benefits, which ...
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Differentially expressed tRNA-derived small RNAs co-sediment primarily with non-polysomal fractions in Drosophila 

Göktaş, Çağdaş; Yiğit, Hatice; Coşacak, Mehmet İlyas; Akgül, Bünyamin (MDPI, 2017-11)
Recent studies point to the existence of poorly characterized small regulatory RNAs generated from mRNAs, rRNAs and tRNAs. To explore the subcellular location of tRNA-derived small RNAs, 0–1 and 7–8 h Drosophila embryos ...
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Master regulators of posttranscriptional gene expression are subject to regulation 

Hamid, Syed Muhammad; Akgül, Bünyamin (Springer, 2014)
MicroRNAs (miRNAs) are small noncoding RNAs of 17-25 nt in length that control gene expression posttranscriptionally. As master regulators of posttranscriptional gene expression, miRNAs themselves are subject to tight ...



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Akgül, Bünyamin (8)
Coşacak, Mehmet İlyas (4)Erdoğan, İpek (2)Göktaş, Çağdaş (2)Nalbant, Ayten (2)Yiğit, Hatice (2)Akıncılar, Semih Can (1)Chen, Chien-Hsiun (1)Chen, Yen-Hui (1)Chen, Yuan-Tsong (1)... View MoreSubjectMicroRNAs (3)Drosophila (2)Polysome (2)RNA (2)Aggregatibacter actinomycetemcomitans (1)Allium sativum (1)Animal cell (1)Apoptosis (1)Biological transport (1)Camptothecin (1)... View MorePublication Type
article (8)
acceptedVersion (1)Languageeng (8)Publication CategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı (7)Makale - Ulusal Hakemli Dergi - Kurum Öğretim Elemanı (1)Access Type
info:eu-repo/semantics/openAccess (8)
Date Issued2018 (3)2014 (2)2010 (1)2012 (1)2017 (1)Full TextYes (8)

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