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dc.contributor.authorÇelik, İbrahim
dc.contributor.authorBodur, Sabahattin
dc.contributor.authorFrary, Anne
dc.contributor.authorDoğanlar, Sami
dc.date.accessioned2017-08-10T11:26:34Z
dc.date.available2017-08-10T11:26:34Z
dc.date.issued2016-09
dc.identifier.citationÇelik, İ, Bodur, S., Frary, A., and Doğanlar, S. (2016). Genome-wide SNP discovery and genetic linkage map construction in sunflower (Helianthus annuus L.) using a genotyping by sequencing (GBS) approach. Molecular Breeding, 36(9), doi:10.1007/s11032-016-0558-8en_US
dc.identifier.issn1380-3743
dc.identifier.urihttp://doi.org/10.1007/s11032-016-0558-8
dc.identifier.urihttp://hdl.handle.net/11147/6069
dc.description.abstractRecently developed plant genomics approaches (LD mapping and genome-wide selection) require many molecular markers distributed throughout the plant genome. As a result, the availability of an increasing number of markers is essential for maintaining highly efficient and accurate plant breeding programs. In this study, we identified SNP loci in sunflower using a genotyping by sequencing (GBS) approach in an intraspecific F2 mapping population. A total of 271,445,770 reads were generated by the Genome Analyzer II next-generation sequencing platform and 29.2 % of the reads were aligned to unique locations in the genome. A total of 46,278 SNP loci were identified and 7646 SNP loci were validated in an F2 population. In addition, a SNP-based linkage map was constructed. This is the first report of SNP discovery in sunflower by GBS. The SNP markers and SNP-based linkage map will be valuable molecular genetics tools for sunflower breeding.en_US
dc.description.sponsorshipScientific and Technological Research Council of Turkey (513O037)en_US
dc.language.isoengen_US
dc.publisherSpringeren_US
dc.relation.isversionof10.1007/s11032-016-0558-8en_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectIllumina Genome Analyzer II platformen_US
dc.subjectGenetic linkage mapen_US
dc.subjectGenotypingen_US
dc.subjectNext-generation sequencingen_US
dc.subjectSingle-nucleotide polymorphismen_US
dc.subjectHelianthus annuus L.en_US
dc.titleGenome-wide SNP discovery and genetic linkage map construction in sunflower (Helianthus annuus L.) using a genotyping by sequencing (GBS) approachen_US
dc.typearticleen_US
dc.contributor.authorIDTR114553en_US
dc.contributor.authorIDTR1977en_US
dc.contributor.iztechauthorÇelik, İbrahim
dc.contributor.iztechauthorFrary, Anne
dc.contributor.iztechauthorDoğanlar, Sami
dc.relation.journalMolecular Breedingen_US
dc.contributor.departmentİYTE, Fen Fakültesi, Moleküler Biyoloji ve Genetik Bölümüen_US
dc.identifier.volume36en_US
dc.identifier.issue9en_US
dc.identifier.wosWOS:000383666700015
dc.identifier.scopusSCOPUS:2-s2.0-84986628170
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US


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