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2-D thresholding of the connectivity map following the multiple sequence alignments of diverse datasets 

Doğan, Tunca; Karaçalı, Bilge (ACTA Press, 2013)
Multiple sequence alignment (MSA) is a widely used method to uncover the relationships between the biomolecular sequences. One essential prerequisite to apply this procedure is to have a considerable amount of similarity ...
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UV-C light inactivation and modeling kinetics of Alicyclobacillus acidoterrestris spores in white grape and apple juices 

Baysal, Ayşe Handan; Molva, Çelenk; Ünlütürk, Sevcan (Elsevier, 2013-09)
In the present study, the effect of short wave ultraviolet light (UV-C) on the inactivation of Alicyclobacillus acidoterrestris DSM 3922 spores in commercial pasteurized white grape and apple juices was investigated. The ...
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Automatic identification of highly conserved family regions and relationships in genome wide datasets including remote protein sequences 

Doğan, Tunca; Karaçalı, Bilge (Public Library of Science, 2013-09)
Identifying shared sequence segments along amino acid sequences generally requires a collection of closely related proteins, most often curated manually from the sequence datasets to suit the purpose at hand. Currently ...
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Optimization of extraction conditions for active components in equisetum arvense extract 

Uslu, Mehmet Emin; Erdoğan, İpek; Bayraktar, Oğuz; Ateş, Mehmet (University of Bucharest, 2013)
Response surface methodology was applied to predict optimum conditions for equisetum arvense extraction. Central composite design was used to monitor the effects of temperature, stirring speed, ethanol percent, extraction ...
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Modeling quasi-static and high strain rate deformation and failure behavior of a (±45) symmetric E-glass/polyester composite under compressive loading 

Kara, Ali; Taşdemirci, Alper; Güden, Mustafa (Elsevier, 2013)
Quasi-static (1 × 10−3–1 × 10−2 s−1) and high strain rate (∼1000 s−1) compressive mechanical response and fracture/failure of a (±45) symmetric E-glass/polyester composite along three perpendicular directions were determined ...
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How do contaminated reservoir bottom sediments affect water quality? An assessment using SWIM model 

Elçi, Şebnem; Şimşek, Sinem Elif (Water Environment Federation, 2013-11)
In this study, an approach for the assessment of long term effects of contaminated sediments on the surface water quality of a future reservoir is presented. A one-dimensional sediment-water interaction model designed to ...
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Online time delay identification and control for general classes of nonlinear systems 

Bayrak, Alper; Tatlıcıoğlu, Enver (SAGE Publications, 2013-08)
In this study, online identification of state delays is discussed. First, a novel adaptive time delay identification technique is proposed for general classes of nonlinear systems subject to state delays. The stability of ...
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Foam glass processing using a polishing glass powder residue 

Attila, Yiğit; Güden, Mustafa; Taşdemirci, Alper (Elsevier, 2013)
The foaming behavior of a powder residue/waste of a soda-lime window glass polishing facility was investigated at the temperatures between 700 and 950 °C. The results showed that the foaming of the glass powder started at ...
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Ampirik Mod Ayrışımı ile bilişsel radar Bayes Hedef Takipçisine işlerlik kazandırılması 

Güntürkün, Ulaş (IEEE, 2013)
Bilişsel radar alıcısının merkez ünitesi niteliğindeki Bayes Hedef Takipçisine (BHT) işlerlik kazandıran Ampirik Mod Ayrışımı (AMA) tekniğine dayalı bir metot sunulmuştur. Tüm Bayes temelli metotlarda olduğu gibi Bayes ...
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Dilute-acid hydrolysis of apple, orange, apricot and peach pomaces as potential candidates for bioethanol production 

Üçüncü, Can; Tarı, Canan; Demir, Hande; Büyükkileci, Ali Oğuz; Özen, Banu (American Scientific Publishers, 2013-07)
Chemical composition of four selected fruit pomaces (agro-industrial wastes) was evaluated. The effect of temperature, time, acid concentration and solid:liquid (S:L) ratio on dilute-acid hydrolysis of selected pomaces ...
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